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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10027885 chr4:105070306 T/A SPINT1 chr15:41136216-41150405:+ 0.44 6.12 2.31E-9 Box Plot
BLCA rs10029434 chr4:182542383 A/C C4orf41 chr4:184580446-184634744:+ 0.73 6.16 1.83E-9 Box Plot
BLCA rs10029434 chr4:182542383 A/C HMGB2 chr4:174252846-174256276:- 0.56 6.15 1.99E-9 Box Plot
BLCA rs10034656 chr4:28491946 C/T C4orf52 chr4:25915814-25931500:+ -0.85 -6.99 1.21E-11 Box Plot
BLCA rs10034995 chr4:12576404 A/G KRTAP13-1 chr21:31768392-31769140:+ 0.15 6.21 1.4E-9 Box Plot
BLCA rs10035180 chr5:176598502 A/G LOC388955 chr2:63849182-63850159:- -0.52 -11.3 9.27E-26 Box Plot
BLCA rs10036193 chr5:176568520 G/C LOC388955 chr2:63849182-63850159:- -0.53 -11.25 1.42E-25 Box Plot
BLCA rs10037055 chr5:176691279 G/T LOC388955 chr2:63849182-63850159:- -0.54 -11.98 2.71E-28 Box Plot
BLCA rs1003719 chr21:38491095 A/G LZTFL1 chr3:45864808-45957534:- 0.31 6.1 2.54E-9 Box Plot
BLCA rs10041668 chr5:176568559 A/G LOC388955 chr2:63849182-63850159:- -0.3 -6.83 3.35E-11 Box Plot
BLCA rs1004343 chr10:130363150 C/T LMO4 chr1:87794151-87814606:+ 0.38 6.33 7.01E-10 Box Plot
BLCA rs10055543 chr5:120889069 A/G RICH2 chr17:12692829-12894959:+ 0.37 6.1 2.63E-9 Box Plot
BLCA rs10056008 chr5:176621148 C/T LOC388955 chr2:63849182-63850159:- -0.51 -11.2 2.21E-25 Box Plot
BLCA rs10056655 chr5:176676351 T/C LOC388955 chr2:63849182-63850159:- 0.68 12.95 4.69E-32 Box Plot
BLCA rs10059821 chr5:151617492 A/G CNOT8 chr5:154237113-154256353:+ 0.53 6.24 1.15E-9 Box Plot